-- DennisGoerlich - 19 Feb 2009

List of Molecules

properties of the molecules that are helpful to define microbial languages

Value in bracket are dimension

  • structural properties
    • molecular weight (g/mol)
    • atom profile (C-content, O-Content, ...) (1, oder 1%)
    • graphtheoretical properties
      • clique count (1)
      • diameter (1)
      • radius (1)
      • connectivity (1)
      • ...
    • surface properties
      • hydrophbicity (1)
      • surface / volume ratio (cm² / cm³ = 1/cm)
      • ...
  • dynamical properties
    • synthesis type (class) / rate (nM/t)
    • response type (class)
    • half-maximal response (nM)
    • diffusion rate in solution (1/t)
    • diffusion rate through a membrane (1/t)
    • information transduction properties (Bayes Networks Analysis) (bits)
  • general information
    • number of producing species (1)
    • number of receiving species (1)
    • inter genera signal (0|1)
    • inter kingdom signal (0|1)
    • function (0,1,2,...)
  • peptide specific properties
    • pI (?)
    • number of amino acids (1)


This topic: Biosys > Trash/Coreteam > DennisGoerlich > VeryOldToDo > MicrobialCommunication > KnownSignalingMolecules
Topic revision: r7 - 2014-10-09 - TWikiAdminUser
 
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